It all begins when the power of the Airlandi's Amber crystals start fading and the city to fall apart. The Dragonators go on a quest for new crystals but Dreadwing, the leader of the forces of evil, kidnaps Peak so their friends go to battle to rescue him.
Fury is acting weird. When they arrive at home Summit finds out that she is pregnant. Meanwhile Dreadwing sent a horde of Gremwings to catch the Dragon's Eggs. The Dragon Flyz have to infiltrate in the Dreadwing's cave and retrieve the Eggs.
The Dragon flyz receive a radio signal and go investigate. When they arrive at the local, they are caught by surprise by Dreadwing and the gang. While they are fighting each other, Kreigo appears. Kreigo is the tribal leader of the 'Dark Dramen of the Highlands'. He and Dreadwing start a fight but at the end they become allies and join forces to attack Airlands.
The Dragon flyz are fighting against Dreadwings, but Z'neth falls into the ground and gets lost from his friends. Dreadwing's men capture Z'neth and take him to the base. There they confuse Z'neth making him think that Dreadwings is his father and attack Airlands. The Dragon flyz must save him from the hypnosis.
DreadWing wants to capture Apex because she can talk to dragons. In her escape she runs into a group of savage dragons and discovers that one of them can turn rock into Ambar Crsytal. Airlands make a deal with the dragons, exchange food for crystals. Dreadwing finds out about the plan and decides to ruin it.
Dreadwing finds out an amber crystal that reacts to light, Crystal Fire. He makes the Dragon Flyz take the crystal to Airlands where it starts to react and crystalize everything. The Dragon flyz see themselves fighting against the crystal and Dreadwings to protect Airlands. They must discover how to stop the crystal reaction.
Gangrene escapes Dreadwing and the Dragon Flyz rescue him. When they arrive at Airlands they decide to keep Gangrene with them, to help. But Gangreene was lying and just wanted to steal a reactor. Z'neth and Orac make a plan to fool Gangrene.
Gangrene has made Warnado fly and Dreadwing is much closer to the victory. Meanwhile Sammit invades the flying cave and tries to destroy the power source of the Warnado. The Dragonators try to make some time by attacking Warnado.
Dreadwing has discovered an insect that transmits a virus only in dragons, making them sick. The Dragon flyz must go to Warnado to get a sample of the insect to make an antidote, but they are without dragons and that makes everything harder.
Z'neth falls of the dragon and discovers a paradise, an ancient place intact from destruction. He call his friends but Dreadwing appears too. Then a battle starts to decide who owns the beautiful place.
The Dragon Flyz find the legendary Mount Alayas and immediately send a team to scan the area. After that they send the first volunteers to rebuild mankind. It was all doing fine but suddenly people start to see crazy things. They must discover the cause of that crazyness
Orac invents a flying machine that is faster and stronger than the dragons. The Dragons are jealous and they leave Airlands. Now the Dragon Flyz must search for crystal with the machine but Dreadwing is always there.
The Dragon Flyz are on a quest for crystals when Dram sees one his people's villages burnt out. He wants to find out what happened and go investigate by himself. He ends up arrested by a clan of savages. The Dragon Flyz go to his rescue.
A solar eclipse reveals a strange and giant sphere. The Dragon Flyz are fighting Dreadwing when they see it. They find entrance in the sphere and decide to explore it. They find out that it's name is Citadel.
Dread banishes Nocturna of Warnado and she goes to the Dragon Flyz for help. They join forces to defeat Dreadwing but some goes wrong.
The Dragon Flyz find a hideout under attack and defeat the attackers. They take the man who was inside to Airlands. His name is Cifex and becomes real close to Apex. One day they are flying with the dragons and Dread captured them. The Dragon Flyz go to their rescue.
The Hell's Gate is the greatest volcano on all earth. When it starts to shake the Dragon Flyz go investigate. They end up inside the volcano in the moment of the eruption.
The Dragon Flyz fight Dreadwing but Peak falls of the Dragon. He starts to walk and finds an old military base, but he is being followed by Dread. They discover that the base contained nuclear missiles.
The Dragon Flyz go on a quest for crystals but they end up trapped by Dreadwing. Z'neth thinks that there's a traitor among them and tries to investigate. They find out Dread has a machine with the power to control the dragons brains.
The Dragon Flyz find a ruin and return to Airlands to report. There, their father tell the story of their mother and how she disappeared on that same ruin. They return to the ruin and find a portal. Dread appears and Peak falls into the portal.
Dread joins forces with the Dark Dramen to destroy Airlands. Sammit is imprisioned for misunderstanding and the Dragon Flyz disappear. While they are missing Airlands is taken.
Dread changed the name of the city to Necropolis. Meanwhile Sammit escape and will try to find his brothers. When he find them, they get back to Airlands to defeat Dread!
The Dragon Flyz were on a mission when Apex was hit by a gas bomb of Nocturna that made her sick. Two children decide to take a baby dragon and go in search of the antidote, but Dreadwing capture they and forces the Dragonators to go after them.
The Dragon Flyz have found a intact place to live but when all the people come to this place, invisible beings begin to attack, and with them comes Dread.
Dreadwing captured Z'neth and Joshua and decided to make a judgment. During the trial are shown scenes of past episodes, like a retrospective.
Peak and Nora fall of their dragons on a mission and end inside a cave. But they are not alone. A small race attack them thinking they are mutants.
